PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM64635.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

MYB

Protein Properties

Length: 354aa MW: 40527.2 Da PI: 9.6347

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM64635.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.1	1.3e-15	4	53	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrwqkyl 48 r+rW +eEd ll +vkq+G++ W++++++m+ ++R +k+c +rw +yl OWM64635.1 4 RQRWRAEEDALLRAYVKQYGPREWHLVSQRMNtpLNRDAKSCLERWKNYL 53 89**********************************************97 PP
2	Myb_DNA-binding	37.3	6.2e-12	59	103	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+ T+eE+ l +++ +++G++ Wk+Ia++++ gRt+k + +w + OWM64635.1 59 KGSLTEEEQRLVIQLQAKHGNK-WKKIAAEIP-GRTAKRLGKWWEVF 103 6788****************.*****.***999999766 PP

Sequence ? help Back to Top
Protein Sequence Length: 354 aa Download sequence
MKERQRWRAE EDALLRAYVK QYGPREWHLV SQRMNTPLNR DAKSCLERWK NYLKPGIKKG 60 SLTEEEQRLV IQLQAKHGNK WKKIAAEIPG RTAKRLGKWW EVFKEKQQRE QKENNRTVHP 120 IEEGKYDQIL ETFAEKIVKE RAAPAFLITG SNNGFLHADT PTVSPSLLPP WLSTSNGTAT 180 LRPPSPSVTL SLSPSTVSTS PPVPWLQPER GLEATSFSLG SLPTHGPGPA PAEAMVLSEL 240 VECCRELEEG HRAWVAHKKE AAWRLKRLEL QLESEKATRR KEKMEEIESK INALREEQKA 300 TLERIEEEHR EQLAGLRSDA ETKEMKLADQ WAMKHQQLYK LVEQMGARSG PAET

Sequence ? help Back to Top

Protein Sequence Length: 354 aa Download sequence

MKERQRWRAE EDALLRAYVK QYGPREWHLV SQRMNTPLNR DAKSCLERWK NYLKPGIKKG  60
SLTEEEQRLV IQLQAKHGNK WKKIAAEIPG RTAKRLGKWW EVFKEKQQRE QKENNRTVHP  120
IEEGKYDQIL ETFAEKIVKE RAAPAFLITG SNNGFLHADT PTVSPSLLPP WLSTSNGTAT  180
LRPPSPSVTL SLSPSTVSTS PPVPWLQPER GLEATSFSLG SLPTHGPGPA PAEAMVLSEL  240
VECCRELEEG HRAWVAHKKE AAWRLKRLEL QLESEKATRR KEKMEEIESK INALREEQKA  300
TLERIEEEHR EQLAGLRSDA ETKEMKLADQ WAMKHQQLYK LVEQMGARSG PAET

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37630.1	1e-143	MYB family protein