PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM64638.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family GRAS
Protein Properties Length: 718aa    MW: 81259.7 Da    PI: 6.6578
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM64638.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS355.67.6e-1093467162374
        GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
                 + lL++cA+av+s+d + +++lL ++++ asp gd +qRla++f+ +L+arla+++s +++ l  ++      se+l+a++l+  +sP+ ++s+++ N+
  OWM64638.1 346 RALLIQCAQAVASNDIRSTNSLLGKIRKYASPFGDGTQRLAHFFADGLEARLAGTGSDICRGLIRKRRV---ASETLKAYQLYLAASPFQRISNIVSNK 441
                 679********************************************************9988666665...89************************* PP

        GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvk 197
                 +Il+ ++ ++++H+iDf+i +G+QWp+L++ L+  p+gpp+lRiTg++ p++g   +e++eetg+rL k+Ae ++vpfe+n+ +ak++e++e+eeL+++
  OWM64638.1 442 TILKIAADAKTLHVIDFGILYGFQWPTLIHHLSRWPGGPPKLRITGIDLPQTGfrPAERVEETGRRLGKYAEGFNVPFEYNA-IAKKWESIEVEELKID 539
                 ****************************************************9*****************************.7*************** PP

        GRAS 198 pgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivn 296
                 ++E+++Vn++++ ++l+de+v  +s rd vL+l+++++P+++++   +  hn++ F++rf eal ++salfd+l+  +pr ++er+ +Er ++g+e+ n
  OWM64638.1 540 KEEVTIVNCMYRFKNLYDETVMENSSRDIVLNLIRKINPTLFIHGIVNGTHNAPFFVTRFREALFHFSALFDMLDIIVPRINQERMLIERDMFGWEALN 638
                 *************************************************************************************************** PP

        GRAS 297 vvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                  vaceg er+er et+++W+ r  +aGF++vpl++k+++     + + + + + ++e s++l++gWk+r L+++S W+
  OWM64638.1 639 SVACEGWERVERPETYKQWQVRNLRAGFEQVPLDKKIVTFLTDRVMTSYHKDFVMDEVSKWLLQGWKGRFLYALSTWK 716
                 **************************************99988888888777*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 718 aa     Download sequence    
MSVNMKRIGT GQSFSTFEAD GSCRELQHIP QKPTSDNSMQ WSSQVHKQHC SEDSDFPDAV  60
LRYINQILME EDIDEESHML QDSLDLQMAE KSLYEVLAQK HPPAPEKSQT FNISQNGKYP  120
DDNFILQQDT GCVSISVNSL GQSSNNCSAV CGVTVLSTSQ LSHSSSNSSL LSTVSSILDY  180
QGCFQPVQFP RQYNWGTNEV GDGDFIANNN DEHCTDPQIT KQLTQGKNGA TSMEFLEQEK  240
QSSEENLCSG VGRRKSHGRE EEMGGEEEER SRKQAAVYAD SELRSEAFDA VLLSSGGENL  300
ARLLSLRASL KDGVSKNLHS VEQPKGSNAR RGRRKKQKEQ ELMDVRALLI QCAQAVASND  360
IRSTNSLLGK IRKYASPFGD GTQRLAHFFA DGLEARLAGT GSDICRGLIR KRRVASETLK  420
AYQLYLAASP FQRISNIVSN KTILKIAADA KTLHVIDFGI LYGFQWPTLI HHLSRWPGGP  480
PKLRITGIDL PQTGFRPAER VEETGRRLGK YAEGFNVPFE YNAIAKKWES IEVEELKIDK  540
EEVTIVNCMY RFKNLYDETV MENSSRDIVL NLIRKINPTL FIHGIVNGTH NAPFFVTRFR  600
EALFHFSALF DMLDIIVPRI NQERMLIERD MFGWEALNSV ACEGWERVER PETYKQWQVR  660
NLRAGFEQVP LDKKIVTFLT DRVMTSYHKD FVMDEVSKWL LQGWKGRFLY ALSTWKPA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.10.0GRAS family protein