PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM64736.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

NAC

Protein Properties

Length: 506aa MW: 56428.9 Da PI: 4.6879

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM64736.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	103.4	2.9e-32	13	141	1	127
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk......kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lp+G+r +P+de+lv+++L++k+++ e i+e+diyk+ PwdL + ++++ +++f+++r++ ++gkrknr t+ g+Wk tg+ ++ + OWM64736.1 13 LPVGYRLNPSDEDLVNHHLRRKLRNVLEEY-CLIPEFDIYKLPPWDLITkfnelsDLASDGGDCFFYHRRNN--PNGKRKNRRTDGGFWKVTGEGRKPK 108 799******************9988666.67**********7524544433345557788887655..89****************999 PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyr 127 + ++++++lk++Lv++ g+++++ekt W mhey+ OWM64736.1 109 K-TDRTKWLKRILVYHLGKQKNAEKTPWAMHEYE 141 9.8899*************************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 506 aa Download sequence
MATASKMISM KKLPVGYRLN PSDEDLVNHH LRRKLRNVLE EYCLIPEFDI YKLPPWDLIT 60 KFNELSDLAS DGGDCFFYHR RNNPNGKRKN RRTDGGFWKV TGEGRKPKKT DRTKWLKRIL 120 VYHLGKQKNA EKTPWAMHEY EDTSDPSVVV CRIHKIKPKT GKQKVDSVSS EADSSSSPRA 180 TDRSEPRIEP QETSPEASVH MTMESQNQPP FSNNVPECNT SCPQQMQIDD FLQVDDLEDP 240 QDPQVLTREQ SPCSENTFID GCDQGYVSWS YHPNVTPEEG GDKFIISRTP SGQPPNYVLP 300 GCGSPPQHPQ MMPTEEIYPL TGNTSFNARC SSETYSQSDI HGQGAEFPLV SMNCGRQEPN 360 FKEAQQSTLN LQTPTSPPNS DLTFSPEELQ MLQELLSAPS MLPSPDSSGG GDPSSLYLGQ 420 SCDSQPADLE VTQDFPIELP PSADLDSMLA NFFASSPPPE EVITRQAIIC LQGVGNYEAL 480 GTLQEGICSS YPAIEIFRRN LQVSAS

Sequence ? help Back to Top

Protein Sequence Length: 506 aa Download sequence

MATASKMISM KKLPVGYRLN PSDEDLVNHH LRRKLRNVLE EYCLIPEFDI YKLPPWDLIT  60
KFNELSDLAS DGGDCFFYHR RNNPNGKRKN RRTDGGFWKV TGEGRKPKKT DRTKWLKRIL  120
VYHLGKQKNA EKTPWAMHEY EDTSDPSVVV CRIHKIKPKT GKQKVDSVSS EADSSSSPRA  180
TDRSEPRIEP QETSPEASVH MTMESQNQPP FSNNVPECNT SCPQQMQIDD FLQVDDLEDP  240
QDPQVLTREQ SPCSENTFID GCDQGYVSWS YHPNVTPEEG GDKFIISRTP SGQPPNYVLP  300
GCGSPPQHPQ MMPTEEIYPL TGNTSFNARC SSETYSQSDI HGQGAEFPLV SMNCGRQEPN  360
FKEAQQSTLN LQTPTSPPNS DLTFSPEELQ MLQELLSAPS MLPSPDSSGG GDPSSLYLGQ  420
SCDSQPADLE VTQDFPIELP PSADLDSMLA NFFASSPPPE EVITRQAIIC LQGVGNYEAL  480
GTLQEGICSS YPAIEIFRRN LQVSAS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G33060.2	4e-24	NAC family protein