PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM64762.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family NAC
Protein Properties Length: 336aa    MW: 37817.7 Da    PI: 4.6176
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM64762.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM99.45.1e-3161433128
         NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk......kvka.eekewyfFskrdkkyatgk.....rknratksgyWkatgkd 89 
                 +GfrF+Pt e+lv+++Lk+k++  + e   +i++v+iy+++P dL +        k  ++++ +fF++++++++++      + +r++ +gyWk+t k+
  OWM64762.1   6 MGFRFNPTPEQLVNYHLKRKLQMINDEDRCMIPDVNIYEYDPGDLCAvynekcW-KRsTSSDSFFFCPQKRRNTNSGsskkcNYSRKAGDGYWKETSKK 103
                 7*********************999888677**************743455431.22244488******99999644233334556688********** PP

         NAM  90 kevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                 + ++++ +ge++g+k++  fy g++++ ++tdW +hey+l
  OWM64762.1 104 RGIKDEeTGETIGTKRIYSFYYGNQNDHRETDWALHEYHL 143
                 ****9878899****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    
MEREIMGFRF NPTPEQLVNY HLKRKLQMIN DEDRCMIPDV NIYEYDPGDL CAVYNEKCWK  60
RSTSSDSFFF CPQKRRNTNS GSSKKCNYSR KAGDGYWKET SKKRGIKDEE TGETIGTKRI  120
YSFYYGNQND HRETDWALHE YHLSAAVADN TIPDPTAFVL CHIKKKKMSQ QANSKNQQTT  180
STASPCGEAE ADASASAVTP GNTEEIAAQG KTPEGSALVM EGPQLLVAEQ SPIISPSPSS  240
ELDRAYGFFN DPSYCFMDNP LENHIRGQDN IPAAAFHEKE TMQSGTLPTE MSITDWPDWP  300
DYPMRGTCDS SEGNFTSDNS DDDFNPDVFM NLWGGN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35580.17e-26NAC family protein