PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM64810.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family bHLH
Protein Properties Length: 294aa    MW: 31822.8 Da    PI: 8.0601
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM64810.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH20.68.1e-07169210854
                 HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                   r RR+r+ ++++ L++l+ +      +K + a++L +A+ YI+ L
  OWM64810.1 169 KTRGRRERLGERIAALQQLVSPH-----GKTDTASVLHEAMGYIRFL 210
                 5699****************887.....9****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    
MSIELASLAV SPNRVPIIDM ADDDRIVDFD WELQTMRGTF SQLLFADDLA GFALSETTSL  60
GSSLSCLSPY SKQDPPKMLR FGNPKEDEST EVKAAFTEPA RSITTDPKRS TSSLTSRDTS  120
TGCLPTSKRR EGFLHGLVQS SSGIVLTAPT VNGRSSKRSK TENAPSNRKT RGRRERLGER  180
IAALQQLVSP HGKTDTASVL HEAMGYIRFL HEQVQVLCSP YLQQFPSSPE PPEGGGNTGE  240
ESTSSLRKRS LRSRGLCLIP LACTAHVAAC NGADFWSPAM CNANLSSSSS PLLQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1168175RKTRGRRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19500.14e-31bHLH family protein