PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM64860.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ERF
Protein Properties Length: 219aa    MW: 24509.1 Da    PI: 4.7633
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM64860.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.91.4e-19120171155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 ++y+GVr+++ +g+++AeIrdp+ ng  +r +lg++ t+e+Aa a+++a+ k++g
  OWM64860.1 120 TQYRGVRRRP-WGKYAAEIRDPKRNG--ARRWLGTYETPEDAALAYDRAAFKMRG 171
                 58********.**********98776..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    
MHKESLMSDS EFALLESIRH YLFSDDHDTN WGTIPEFFKD ELCWESPSIA NNHFPSDDSI  60
SSPASNEEEN GGSFGAVGDD IIVDFPLVDS SSPDDCQAGA DCVAMVNDQV NYYVPVPRAT  120
QYRGVRRRPW GKYAAEIRDP KRNGARRWLG TYETPEDAAL AYDRAAFKMR GSKARLNFPH  180
LIGCDGVEPV RVNPKRRRVF KNPSGNDCSQ APPEDLMGC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1195199KRRRV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.17e-44ERF family protein