PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM64862.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ERF
Protein Properties Length: 219aa    MW: 24232.8 Da    PI: 4.6801
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM64862.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.53.8e-19121171255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +g+++AeIrdp+ ng  +r +lg++ t+e+Aa a+++a+ k++g
  OWM64862.1 121 QYRGVRRRP-WGKYAAEIRDPKRNG--ARRWLGTYETPEDAALAYDRAAFKMRG 171
                 59*******.**********98776..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    
MNKESLVSDS EFALLESIRH YLLSDDLETN WGTIPRFFED ELCGESPSIT NNLLPSDDSV  60
SSLASNEEEN GGSFGAVGDD IVVDFPLVDP SSPDDCQAGA DCAAVANDQA NYYVPVPRVM  120
QYRGVRRRPW GKYAAEIRDP KRNGARRWLG TYETPEDAAL AYDRAAFKMR GSKARLNFPH  180
LIGGDGVEPV RVKPKHRRVF KNPSGSDCSQ SQPEDRMGC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.12e-45ERF family protein