PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM64890.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

SBP

Protein Properties

Length: 339aa MW: 36911.8 Da PI: 8.721

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM64890.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	128.4	2.7e-40	183	260	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cq+e+C+adl++ak+yhrrhkvCe+hska++v+++gl+qrfCqqCsrfh lsefD++krsCr+rLa+hn+rrrk+q+ OWM64890.1 183 RCQAESCNADLTHAKHYHRRHKVCEFHSKAAAVIAAGLTQRFCQQCSRFHLLSEFDNGKRSCRKRLADHNRRRRKSQQ 260 6**************************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 339 aa Download sequence
MLDYEWAAAN PSSVMLSADD PACPDPSHGH PFVDHYAAAT VGATGHHVLP VPTEAAGGPA 60 FFSSHFNHSY HHHQQTAHQN NLFPFYESRS YGTVPSDYHS GPGPFYHDSY PGPGSGGLFM 120 AVPKREDAVV QAAPGSGGDF TARIGLNLGG RTYFSSAEDD FVSRLYRRSR PLEAVGGSAK 180 APRCQAESCN ADLTHAKHYH RRHKVCEFHS KAAAVIAAGL TQRFCQQCSR FHLLSEFDNG 240 KRSCRKRLAD HNRRRRKSQQ QPNLEIHKPS PQAGQSALID RLAMSLQDSG NQSSSSVTIA 300 VSPPRMSLDS CFRQRPIYNQ QPQASSSSAS SGSLFFSSG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G02065.1	1e-69	SBP family protein