PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM64896.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family GATA
Protein Properties Length: 248aa    MW: 27123.1 Da    PI: 5.9413
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM64896.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA56.34.3e-18161195135
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 C++C + +Tp+WR gp+g+ktLCnaCG++y++ +l
  OWM64896.1 161 CTHCASESTPQWRTGPQGPKTLCNACGVRYKSGRL 195
                 *******************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
MDVYGMSSST PDHVFRIDDL LDLSNGDLFS STLSAASTSD DSLNALSTTA PPPPPPPPLP  60
DLSFSFSSSS SPAAPIFPDD FSFTPSDDVF ELEWVSRFVD DSLSDVVIPA NSVAGTLAVR  120
PDATAFSGKP RTKRSRPVCG NGKLTEENSA DAGVEAAVRR CTHCASESTP QWRTGPQGPK  180
TLCNACGVRY KSGRLVPEYR PAASPTFVLT QHSNSHRKVM ELRRQKELSR QEQHYRYQQQ  240
QQHDFQVC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60530.12e-57GATA family protein