PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM64907.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family GRAS
Protein Properties Length: 717aa    MW: 77826.2 Da    PI: 6.6628
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM64907.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS298.22e-913497163374
        GRAS   3 elLlecAeavssgdlelaqalLarlsel.aspdgdpmqRlaayfteALaarlarsvselykalppsetsekn.......sseelaalklfsevsPilkf 93 
                 + L+++Ae +++g+  laq +Larl+++  sp g+p++R+a+y +eAL++ l+++ ++l+   +p + +           + ++ a+k f e+sP+++f
  OWM64907.1 349 DHLYKAAELIETGNPVLAQGILARLNHHqLSPVGKPFRRAAFYCKEALQSLLHHHHPHLVGPANPPQPPLPPlppppfgIIYKIGAYKSFCEISPVVQF 447
                 689************************999*****************************998876666544468889999******************* PP

        GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledlel 191
                 +++t+Nqa lea+eg +r+Hi+ f+++ G+ W++L+q+L  R++gpp  lRiT+++sp ++++ el  t++ L++fA+el++ +ef+v+  +++++   
  OWM64907.1 448 ANFTCNQAFLEALEGFSRIHILSFEVGFGGEWASLMQELVLRNGGPPsLLRITVFASPGTHDELELGLTQDTLKHFAHELNMALEFEVVSIESFNSA-- 544
                 *******************************************9999679**************************************955554443.. PP

        GRAS 192 eeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErell 290
                  +L  + gEa+aV l +  ++ +      +s+ ++ ++++k+lsPk+vv  ++ +d+++++F +++++al++ys+l++sl+a    + ++ +k+Er l+
  OWM64907.1 545 INLPSDGGEAIAVYLPIGSFSSY------PSYLPAAVRFIKQLSPKIVVSLDRGCDRSDTPFPNHMIHALQCYSSLLESLDAV-NVNLDALQKIERYLI 636
                 6788888**********988887......677788*********************************************665.3566999******** PP

        GRAS 291 greivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 ++ i+ +v  ++++     e++  Wr+ + ++GF+p+++s+++++qa++l+++   +g++ve+++ slvl+W++++Lvs+SaWr
  OWM64907.1 637 QPGIERIVNGRQRS----PEKMIAWRSLFLSCGFSPLTFSNFNESQAECLVQRSLARGFHVEKRQSSLVLCWHRKELVSASAWR 716
                 ********998888....9****************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 717 aa     Download sequence    
MKATPLLFEE FQGKGLLDFS SSSSPSATTT CSNSQLNYNH SNLSTAVTTA ATTPPTKGKL  60
YVGSPSPSPP AAASSSTLSS SLNSGDILGG GGSGRCGGGM GAEEDWEAVL PETAASPGHE  120
QSILRLIMGD IEDPSLGLSK LLHSSSAPQD MEFGGGGFGF MDPQALTFDG PNLMMGGPNS  180
SIDPASLQDL PLTNATSNLR HVSPFPLFTD SVHSTVMPFP LPPGVIQQPH NESMDEKPQI  240
FNPQLIINQN QVQFPQNPSL VPLGFNAVQD HPLSSSGPPL PKRLNPGPVG SNFVGPRGNF  300
PNSGQSHNHH HHPQHHQFQQ RPAMVMKQHQ QKVAGEELAN HQLQQAITDH LYKAAELIET  360
GNPVLAQGIL ARLNHHQLSP VGKPFRRAAF YCKEALQSLL HHHHPHLVGP ANPPQPPLPP  420
LPPPPFGIIY KIGAYKSFCE ISPVVQFANF TCNQAFLEAL EGFSRIHILS FEVGFGGEWA  480
SLMQELVLRN GGPPSLLRIT VFASPGTHDE LELGLTQDTL KHFAHELNMA LEFEVVSIES  540
FNSAINLPSD GGEAIAVYLP IGSFSSYPSY LPAAVRFIKQ LSPKIVVSLD RGCDRSDTPF  600
PNHMIHALQC YSSLLESLDA VNVNLDALQK IERYLIQPGI ERIVNGRQRS PEKMIAWRSL  660
FLSCGFSPLT FSNFNESQAE CLVQRSLARG FHVEKRQSSL VLCWHRKELV SASAWRC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00150.11e-136GRAS family protein