PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM65176.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ERF
Protein Properties Length: 175aa    MW: 19458.1 Da    PI: 9.6535
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM65176.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP249.97.7e-16857255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                ++ GVr+++ +grWvAeI+d s    + r +lg+f+ aeeAa a++ a++ l+g
  OWM65176.1  8 RFLGVRQRP-SGRWVAEIKDSS---LKLRLWLGTFDRAEEAALAYDSAARLLRG 57
                678******.7*********42...35***********************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 175 aa     Download sequence    
MKKHPKTRFL GVRQRPSGRW VAEIKDSSLK LRLWLGTFDR AEEAALAYDS AARLLRGRNA  60
RTNFPCREQV TVNSIRLQAN PMFHRLLSHA NTKQLLRSSL DNSWRNGGKY DDIHLMNFDA  120
VVEETIVCTS EDGIGCLGCT EEHDGSSTNK ICGVSVGSSK VYSSVVVAPS FSRAS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.12e-16ERF family protein