PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM65200.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

Dof

Protein Properties

Length: 328aa MW: 34859.3 Da PI: 6.6189

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM65200.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	124.9	2.5e-39	39	98	2	61
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +++alkcprCds ntkfCyynny+lsqPr+fCk+CrryWtkGG lrnvPvGgg+rk k+s OWM65200.1 39 HQQALKCPRCDSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKTKRS 98 57899****************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 328 aa Download sequence
MQDIHSIAGG RIFGGGGGGG AGDRRLRPHH HHPQSSHLHQ QALKCPRCDS LNTKFCYYNN 60 YNLSQPRHFC KNCRRYWTKG GVLRNVPVGG GCRKTKRSKP KPSASAEPAT AMAEAVTTTT 120 SAAPHAMDLK TSSHSSSESS SLTATTTAAA AEAVSATSSV SPSSFFNIHD YKSIIEQTMN 180 PPAPGSHGFD QGLLEQSSGC GLFSEIGNFS SLITSAAEPL LFGFGGVVDQ SNQWSSSQQA 240 QDQEQKLQQG AGEIPSSDGS GPFLDQTVQV DLPGLPGKPS GNEAFGPLDW QPAADQGLFD 300 ITCGVDQAYW GQNAQWADED HQHGLYLP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	9	17	GGRIFGGGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60850.1	2e-36	Dof family protein