PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM65283.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

NAC

Protein Properties

Length: 361aa MW: 40870.4 Da PI: 7.4136

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM65283.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	181.3	2.4e-56	18	143	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 lppGfrFhPtdeel+++yL+kkv + ++ + ++i evd++k+ePwdLp+k+k +ekewyfF+ rd+ky+tg r+nrat++gyWkatgkdke+++ +++l OWM65283.1 18 LPPGFRFHPTDEELISHYLHKKVMDVNFWA-SAIGEVDLNKSEPWDLPRKAKMGEKEWYFFCIRDRKYPTGLRTNRATEAGYWKATGKDKEIYR-GKSL 114 79***********************999.88***********99999**************************************.999 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 vg+kktLvfy+grapkgekt+Wvmheyrl OWM65283.1 115 VGMKKTLVFYRGRAPKGEKTNWVMHEYRL 143 ***************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 361 aa Download sequence
MEMENVPGIG KEDHRIDLPP GFRFHPTDEE LISHYLHKKV MDVNFWASAI GEVDLNKSEP 60 WDLPRKAKMG EKEWYFFCIR DRKYPTGLRT NRATEAGYWK ATGKDKEIYR GKSLVGMKKT 120 LVFYRGRAPK GEKTNWVMHE YRLDGKLSHQ YLPKSAKNEW VISRVFEKTA GGKKIHITDL 180 MRVGSIANQD CPALPPLTDS SPQTTKAEPV PESAAYVPCF SNPIENKEHT DPLFTNIDPL 240 FSVSSNASTV PRVPILGSLY SGQPVSIPPN QEYPGPVLMQ EQSILRALLE NPNLKVEREM 300 IDASQEVVLA SNMNHPEMSS VVPGFDLGRR VAFRDQHQHQ HQQAPSTSAA GPSELDFIWN 360 Y

Sequence ? help Back to Top

Protein Sequence Length: 361 aa Download sequence

MEMENVPGIG KEDHRIDLPP GFRFHPTDEE LISHYLHKKV MDVNFWASAI GEVDLNKSEP  60
WDLPRKAKMG EKEWYFFCIR DRKYPTGLRT NRATEAGYWK ATGKDKEIYR GKSLVGMKKT  120
LVFYRGRAPK GEKTNWVMHE YRLDGKLSHQ YLPKSAKNEW VISRVFEKTA GGKKIHITDL  180
MRVGSIANQD CPALPPLTDS SPQTTKAEPV PESAAYVPCF SNPIENKEHT DPLFTNIDPL  240
FSVSSNASTV PRVPILGSLY SGQPVSIPPN QEYPGPVLMQ EQSILRALLE NPNLKVEREM  300
IDASQEVVLA SNMNHPEMSS VVPGFDLGRR VAFRDQHQHQ HQQAPSTSAA GPSELDFIWN  360
Y

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G61430.1	1e-138	NAC family protein