PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM65318.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

bHLH

Protein Properties

Length: 98aa MW: 10783.1 Da PI: 7.5242

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM65318.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	26.7	1e-08	26	67	14	55
HHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 14 driNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 d+i++ ++L++llP++ + +s ++s a +L++++++I+sLq OWM65318.1 26 DQIRDLVSKLQQLLPELHSRSSDRVSAAKVLQETCNHIRSLQ 67 68999*********8899*******************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 98 aa Download sequence
MSGRRSRSRP GQYPSSGSNV PAITEDQIRD LVSKLQQLLP ELHSRSSDRV SAAKVLQETC 60 NHIRSLQREV DDLSERLGEL LATSDSAEAA IIRSLLSP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G74500.1	2e-34	bHLH family protein