PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM65351.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family bHLH
Protein Properties Length: 277aa    MW: 30226.8 Da    PI: 5.9926
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM65351.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.71.4e-10146193455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++YI+sLq
  OWM65351.1 146 SHSLAERARREKISERMKVLQDLVPGC----NKVIGKALVLDEIINYIQSLQ 193
                 8*************************9....677*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MDPPLINESS FSPAHPSAYS LAEIWPFSGE PGSGGLGLRI GNLGGLVETR DGSLEESTVT  60
DQSGARKRKE ESSEMVSTSS ANDLNNSNGK RAKLAGPRDK NGGPKAEAES SSAPGSKTTE  120
QIAKPSEPPK QDYIHVRARR GQATDSHSLA ERARREKISE RMKVLQDLVP GCNKVIGKAL  180
VLDEIINYIQ SLQCQVEFLS LKLEAVNSRM NLTPSMEAFP TKDLGATSFD ATGMMFASQA  240
ARDYMQGSHP EWLHMHRSEG ALRERLDLVW SISEDRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62610.19e-78bHLH family protein