PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM65441.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family MYB_related
Protein Properties Length: 243aa    MW: 27476.9 Da    PI: 7.9426
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM65441.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding58.21.8e-18191237148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      +g WT eEd llv++v+q+G + W+ Ia++++ gR +kqc++rw+++l
       OWM65441.1 191 KGQWTIEEDRLLVRLVEQFGVRKWSHIAQMLP-GRIGKQCRERWHNHL 237
                      799*****************************.*************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    
MEHSSKLVEN LTSSQSLLLS DHFDHYQKSQ SKIVETRSGT MHEFHGLDQL QVANISSPVP  60
PFRAMQNPLL PEIPPENYGF NGTTIDLDFY ENKPYVDTYG GGHGQVMDNF QGGGYLGNFT  120
ERTGSCMAGQ YFNCQLDVKP MSFVAPDEIS CISAENGYSY QNQYGTSKAR ALASSTARRA  180
CKSRTKSHVV KGQWTIEEDR LLVRLVEQFG VRKWSHIAQM LPGRIGKQCR ERWHNHLRPD  240
IKV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18770.13e-37MYB family protein