PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM65451.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family MYB_related
Protein Properties Length: 140aa    MW: 15331 Da    PI: 6.388
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM65451.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding35.13e-112291948
                     TTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding 19 lGggtWktIartmgkgRtlkqcksrwqkyl 48
                     lG + W++Ia +++ gRt++q+k++w+++l
       OWM65451.1  2 LGCR-WSLIAGRVP-GRTDNQVKNHWNTHL 29
                     7888.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 140 aa     Download sequence    
MLGCRWSLIA GRVPGRTDNQ VKNHWNTHLS KKLGFKKGIS KGKASSNSEE VEENPSMPQV  60
ANSKKLTEHE GGGATGPTAT HDGSHEATRS DFSAQGAAIS SAHDQMGSFF PFVYDNMNLY  120
TPDVIEYMDE CSLDFIWHGL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G14750.18e-17MYB family protein