PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM65535.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

HSF

Protein Properties

Length: 487aa MW: 56099.2 Da PI: 4.435

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM65535.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	108.8	3.9e-34	143	234	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k+ye+++d++++ ++sws++++sf+v+++ efa+ +Lp++Fkh+nf+SF+RQLn+YgF+k++ e+ weF+++ F kg+ +ll++i+ OWM65535.1 143 FLSKMYEMVDDPSTNAIVSWSQSNKSFIVWNPLEFASVLLPRFFKHNNFSSFIRQLNTYGFRKIDPEQ---------WEFANDDFIKGRPHLLRNIH 230 9*************************************************************9998.........****************** PP XXXX CS HSF_DNA-bind 99 rkks 102 r+k OWM65535.1 231 RRKP 234 *985 PP

Sequence ? help Back to Top
Protein Sequence Length: 487 aa Download sequence
MTMDKFDVHR DEFDVTRDEF DVTKDEFDVS KDKFDVFRNE FDVAKDEFDV TRNELDVIGD 60 EFDVTRDDFD VTMDEFDESQ AFCFEFRVIV LSQIAGGEYG VAPVELSFSN WMEFFMVQRA 120 VSASIVLKMD ASQSSLMNSL PPFLSKMYEM VDDPSTNAIV SWSQSNKSFI VWNPLEFASV 180 LLPRFFKHNN FSSFIRQLNT YGFRKIDPEQ WEFANDDFIK GRPHLLRNIH RRKPVHSHSS 240 PNLQQNQGIS SSSLTESERQ VYKDKIATLE NDKQLLLSEL EKHEEEERRY ELQMQQLKDR 300 FMRIKEKQRL MVSNLSLVLQ KTSTSPGLEL QGKKRRLARV DFFDEETDDE HDNIANSQLL 360 SIKELYEQLE SSLTFWDDMV HDVSHTYHSR GSDLDIGETT SCVEGDSPNF SCPQLNIDAR 420 SGTHVIDMNS EPPVAINTAS DTAASRERPV GPGTASEAVG INDVFWEQFL TENPGDENQA 480 VHSRGRS

Sequence ? help Back to Top

Protein Sequence Length: 487 aa Download sequence

MTMDKFDVHR DEFDVTRDEF DVTKDEFDVS KDKFDVFRNE FDVAKDEFDV TRNELDVIGD  60
EFDVTRDDFD VTMDEFDESQ AFCFEFRVIV LSQIAGGEYG VAPVELSFSN WMEFFMVQRA  120
VSASIVLKMD ASQSSLMNSL PPFLSKMYEM VDDPSTNAIV SWSQSNKSFI VWNPLEFASV  180
LLPRFFKHNN FSSFIRQLNT YGFRKIDPEQ WEFANDDFIK GRPHLLRNIH RRKPVHSHSS  240
PNLQQNQGIS SSSLTESERQ VYKDKIATLE NDKQLLLSEL EKHEEEERRY ELQMQQLKDR  300
FMRIKEKQRL MVSNLSLVLQ KTSTSPGLEL QGKKRRLARV DFFDEETDDE HDNIANSQLL  360
SIKELYEQLE SSLTFWDDMV HDVSHTYHSR GSDLDIGETT SCVEGDSPNF SCPQLNIDAR  420
SGTHVIDMNS EPPVAINTAS DTAASRERPV GPGTASEAVG INDVFWEQFL TENPGDENQA  480
VHSRGRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G45710.1	2e-76	HSF family protein