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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | OWM65651.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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| Family | HD-ZIP | ||||||||
| Protein Properties | Length: 292aa MW: 32434.1 Da PI: 4.7142 | ||||||||
| Description | HD-ZIP family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | Homeobox | 59.7 | 4.9e-19 | 68 | 121 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
k+++++ eq+++Le+ Fe ++++ e++ +LA++lgL+ rqV vWFqNrRa++k
OWM65651.1 68 KKRRLSVEQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWK 121
56689************************************************9 PP
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| 2 | HD-ZIP_I/II | 130.6 | 6.3e-42 | 67 | 159 | 1 | 93 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93
ekkrrls eqvk+LE++Fe e+kLeperKv+la+eLglqprqvavWFqnrRAR+ktkqlE+dy +Lk++yd+lk + ++L++++++L +e++e
OWM65651.1 67 EKKRRLSVEQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGVLKANYDSLKLSYDALQRDNDALLKEIRE 159
69*************************************************************************************999986 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 292 aa Download sequence |
MKRLGSSDSL GALMSICRAT EEQGSPRSSS AAVAAAAIYG REFQSMLEGL DEDGCGEEVA 60 VVGGPSEKKR RLSVEQVKAL EKNFEVENKL EPERKVKLAQ ELGLQPRQVA VWFQNRRARW 120 KTKQLERDYG VLKANYDSLK LSYDALQRDN DALLKEIREL KSKLNENSDQ SNLSLKDEAT 180 AASESENTKL MGETKPTPTL LPNLDPKEPN LSSDSDSSAI LNEENAASSS PSNAAISSSG 240 VGVLQPQQHN LMLYPQHYVK LEEHNFLGDE ACNFFSDEQA PTLHWYCPDQ WN |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 68 | 97 | KKRRLSVEQVKALEKNFEVENKLEPERKVK |
| 2 | 116 | 124 | RRARWKTKQ |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT4G40060.1 | 5e-73 | HD-ZIP family protein | ||||
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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