PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM65673.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family GRAS
Protein Properties Length: 468aa    MW: 52541.7 Da    PI: 5.8883
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM65673.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS302.21.2e-92494652373
        GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn.....sseelaalkl..fsevsPilkf 93 
                 ++lL++cA+a++s+d++laq++L+ l+++a pdgd++qRl+  f++AL ar ar  ++ +k l++ ++s+++     +++++++ +l  f++++P+++f
  OWM65673.1  49 EQLLVHCANAIESNDATLAQQILWVLNNTAPPDGDSNQRLTCGFLRALIARAAR--NGSCKMLAAVAASNYDiallhETHRFSVIELasFVDLTPWHRF 145
                 79****************************************************..777777877777777777666666666666689********** PP

        GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp..egppslRiTgvgspesg..........skeeleetgerLakfAeelgvpfefnv 180
                 ++ +aN aIleaveg + +Hi+D++ ++++Q p+L++a+asR+  ++pp +++T+   +e++          +  ++ee+g++L +fA + +v+++f+v
  OWM65673.1 146 GFTAANAAILEAVEGYSVIHIVDLSSTHCMQIPTLIDAIASRSleAPPPIVKLTVAWVAEEDghvpppppllDDVSYEELGRKLVNFAMSRNVTLKFQV 244
                 *******************************************988999*****98777766789********************************** PP

        GRAS 181 l.......vakrledleleeLrvkp.....gEalaVnlvlqlhrll......................desvsleserdevLklvkslsPkvvvvveqe 245
                 +       +++      +e+Lrv++      Eal++n+++ lh++                        e+ +l s+r+ +Lk+++sl P++vv+v+++
  OWM65673.1 245 VhssyregYSTL-----IEHLRVQNfykdnCEALVINCHMTLHYISeetqlttllhdpnpsgnnpyphFEPSALVSPRTMFLKALRSLDPTIVVLVDED 338
                 955433333333.....55666555555559************************************999999999*********************** PP

        GRAS 246 adhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkv 344
                 ad +s+++++r+ +a++y +  +d++++ lp+ s++r+++E+  + ++i+nv+a+ega+r+er e +++W +r+++aGF+   ++e+a++++k++l ++
  OWM65673.1 339 ADFTSNDLVDRLRSAFNYLWIPYDTVDTFLPKGSKQRQWYEAD-VCWKIENVIAHEGAQRIERVEPKSRWVQRMRSAGFRGFGFGEEAVSEVKSMLDEH 436
                 *******************************************.99***************************************************** PP

        GRAS 345 k.sdgyrveeesgslvlgWkdrpLvsvSaW 373
                 + ++g +  ee++ lvl+Wk++++v+++aW
  OWM65673.1 437 AaGWGLKK-EEEDHLVLTWKGHNVVFATAW 465
                 *5555543.5577899************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 468 aa     Download sequence    
MPFTETLAPH LLADMNNKNQ VHRTRPWPGL FPAGPKTTFT SFGDANCMEQ LLVHCANAIE  60
SNDATLAQQI LWVLNNTAPP DGDSNQRLTC GFLRALIARA ARNGSCKMLA AVAASNYDIA  120
LLHETHRFSV IELASFVDLT PWHRFGFTAA NAAILEAVEG YSVIHIVDLS STHCMQIPTL  180
IDAIASRSLE APPPIVKLTV AWVAEEDGHV PPPPPLLDDV SYEELGRKLV NFAMSRNVTL  240
KFQVVHSSYR EGYSTLIEHL RVQNFYKDNC EALVINCHMT LHYISEETQL TTLLHDPNPS  300
GNNPYPHFEP SALVSPRTMF LKALRSLDPT IVVLVDEDAD FTSNDLVDRL RSAFNYLWIP  360
YDTVDTFLPK GSKQRQWYEA DVCWKIENVI AHEGAQRIER VEPKSRWVQR MRSAGFRGFG  420
FGEEAVSEVK SMLDEHAAGW GLKKEEEDHL VLTWKGHNVV FATAWLPT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49950.11e-167GRAS family protein