PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM65709.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family NAC
Protein Properties Length: 164aa    MW: 19167.8 Da    PI: 9.7599
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM65709.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM174.72.6e-5491381129
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 
                 +ppGfrFhPtdeel+++yLkkkv+ +k+++ evi+evd++k+ePw+L++  ++ +  ++ewyfFs++d+ky+tg+r+nrat++g+Wkatg+dk + s +
  OWM65709.1   9 VPPGFRFHPTDEELLQYYLKKKVSFQKFDM-EVIREVDLNKMEPWELQErcRIGStPQNEWYFFSHKDRKYPTGSRTNRATNAGFWKATGRDKCIRS-T 105
                 69****************************.99**************963433332556*************************************9.8 PP

         NAM  97 gelvglkktLvfykgrapkgektdWvmheyrle 129
                  +++g++ktLvfy+grap+g+ktdW+mheyrle
  OWM65709.1 106 YRKIGMRKTLVFYRGRAPHGQKTDWIMHEYRLE 138
                 999****************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 164 aa     Download sequence    
MGSSSNGGVP PGFRFHPTDE ELLQYYLKKK VSFQKFDMEV IREVDLNKME PWELQERCRI  60
GSTPQNEWYF FSHKDRKYPT GSRTNRATNA GFWKATGRDK CIRSTYRKIG MRKTLVFYRG  120
RAPHGQKTDW IMHEYRLEDG DDLQGNHSVS LICQSALIII IAIN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G10350.11e-101NAC family protein