PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM65733.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

NAC

Protein Properties

Length: 283aa MW: 31471.4 Da PI: 6.5838

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM65733.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	48.1	3.7e-15	6	52	1	48
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp 48 +ppGfrF+Pt+eelv +yLk+k+++ ++l + i+++d+y++ePwd++ OWM65733.1 6 VPPGFRFRPTEEELVGYYLKRKISSLGIDL-HLITDIDLYNMEPWDIQ 52 69**************************.88***********96 PP
2	NAM	73.9	3.9e-23	52	111	70	128
NAM 70 tgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 +g+r+nrat++g+Wkatg+dk+vls+ +++ +g++ktLvfy grap+g+ktdW++heyrl OWM65733.1 52 QGTRTNRATAHGFWKATGRDKAVLSRnTSSIIGMRKTLVFYGGRAPNGRKTDWIIHEYRL 111 689********************966677*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 283 aa Download sequence
MEESCVPPGF RFRPTEEELV GYYLKRKISS LGIDLHLITD IDLYNMEPWD IQGTRTNRAT 60 AHGFWKATGR DKAVLSRNTS SIIGMRKTLV FYGGRAPNGR KTDWIIHEYR LQTSQHAPPQ 120 PQASLPPSLQ LAPFPSISTQ TISTTALSDE INMDVGSSQL VELPTRISAN SDIVSRRPLE 180 QATVVVTSHQ RMCDVLHSED YYNLDSDWKA LNNSSLLIAP EQTSSTSSDH ANHRLLPLLP 240 PPFGTHELAL HLAHESQAGN YPFVSCLNDK SPYITSSGLA FSN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G71930.1	4e-55	NAC family protein