PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM65805.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ARR-B
Protein Properties Length: 687aa    MW: 74457.1 Da    PI: 6.5125
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM65805.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like91.38.4e-29213266155
     G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                 kpr++W+ +LH++Fv av+qL G ekA+Pk+il+lm+v+gLt+e+v+SHLQkYRl
  OWM65805.1 213 KPRVVWSVDLHRKFVAAVNQL-GLEKAVPKKILDLMNVEGLTRENVASHLQKYRL 266
                 79*******************.********************************8 PP
2Myb_DNA-binding38.82.1e-12215265148
                      TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r  W+ +++ ++v av+qlG +   +k+I   m+ +g+t++++ s++qky+
       OWM65805.1 215 RVVWSVDLHRKFVAAVNQLGLEkaVPKKILDLMNvEGLTRENVASHLQKYR 265
                      678***********************************************7 PP
3Response_reg821.9e-27271351109
                   EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS
  Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 
                   vl vdD+p+ +++l ++l+  +y +v+++ ++  al++l+ek+  +Dl++ D++mp+mdG++ll+     e+++p+i+++ah++ e++++ +  Ga 
    OWM65805.1  27 VLAVDDDPTCLKILDNLLRYCKY-HVTTTNQAVMALKMLREKRdeFDLVISDVNMPDMDGFKLLELVGL-EMDIPVIMLSAHSDYELVKKGVTHGAV 121
                   799********************.***************999999*******************87754.558************************ PP

                   EEEESS--HHHHHH CS
  Response_reg  96 dflsKpfdpeelvk 109
                   d+l Kp+  eel +
    OWM65805.1 122 DYLNKPVRVEELKN 135
                   ***********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 687 aa     Download sequence    
MTVESRKGGL LGGEEGSRDM FPVGMRVLAV DDDPTCLKIL DNLLRYCKYH VTTTNQAVMA  60
LKMLREKRDE FDLVISDVNM PDMDGFKLLE LVGLEMDIPV IMLSAHSDYE LVKKGVTHGA  120
VDYLNKPVRV EELKNIWQHV VRRKKIEPKD QNKSSSGDRA HSGTGEVGQG ASVGTNSDLN  180
GKVNRKRSDH DEEEDDEGEE NGRENEDSSS QKKPRVVWSV DLHRKFVAAV NQLGLEKAVP  240
KKILDLMNVE GLTRENVASH LQKYRLYLKR IHNAASQQAN LVAALGSKDP SYMRYGSPDG  300
YGDFRGLTGP GRLSATSLSS YPPGGMLGRL NTPAGLGFRG ISSTGLLQPT HSHNSGGSAH  360
FMGHLQSQGA INPSSTLFQG IPSTLEVNQL QPQSKVVGAV RELNVVDPMA LRVSNKITDP  420
LMAASSSSNN SLSIVSSNHL LLQNNRIKPS VQVGPLHSQP VDLGPSSSGF IDQSRCNDSW  480
HGGTAQNSKF SSINNHMPLS EPLNNFQLPP NGNFSSTTSH VRDSQIDFSS PSAVSGVLDD  540
SRRGVPCQGG LISNNNSTVQ NVSSYGQGFG AMNSLIPASG FVGQKVHHQE TAFCSRSSDA  600
PLIGQSNSAV VPANIPQSKG EISSLDSNTR SSENYLSDQT KTHDDFFQSP FEPLDELMNA  660
MIKREHNDGS LLDGDLGFDP YPLGSCI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25180.11e-121ARR-B family protein