PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM65990.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

G2-like

Protein Properties

Length: 489aa MW: 53277.2 Da PI: 7.1599

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM65990.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.3	6.4e-32	270	325	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+p+LH+rFv+a++ LGGs++AtPk+i+elmkv+gLt+++vkSHLQkYRl+ OWM65990.1 270 KARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLH 325 68****************************************************97 PP
2	Myb_DNA-binding	40.3	7.5e-13	272	323	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W+++++ ++v+a ++lGg t+k I + m g+t ++ks++qky+ OWM65990.1 272 RRCWSPDLHRRFVNALQMLGGSqvaTPKQIRELMKvDGLTNDEVKSHLQKYR 323 568***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 489 aa Download sequence
MASPSELSLE CKPHSYSMLL KSFGDQQAAM PSVDPAQKLE DFLARLEEER LKIDAFKREL 60 PLCMQLLTNA LEASRQQLQA YRANQGPRPV LEEFIPLKKS PSEGTEKTSS NLSDKANWMT 120 SAQLWSQASD GTKQQTGTIT SPPKEIDIGF NVSPKLALDN KPRNGGAFLP FSKDRNMSTN 180 PTFQALPELA LASNEKEMED KKYTDTENGI LCPRRDNNNN NTNSIKGGNI INGMVIEQAK 240 ATGSSPEGQP VVSNTAANTT SSTNPQTHRK ARRCWSPDLH RRFVNALQML GGSQVATPKQ 300 IRELMKVDGL TNDEVKSHLQ KYRLHTRRPS PSPQATGAAT PQLVVLGGIW VPPEYATAAA 360 AAAHGGSPAL YGAHPASHAP PHYCTPTVPA QEYYTSAGPP PSTPHHEIHH HPLHHQIHVY 420 KATSQTHSSP ESGMRGTGDQ SESIEDGKSE SSSWKGDTSG ENGGDQRKGL SNLRDDNEES 480 NGSEITLKF

Sequence ? help Back to Top

Protein Sequence Length: 489 aa Download sequence

MASPSELSLE CKPHSYSMLL KSFGDQQAAM PSVDPAQKLE DFLARLEEER LKIDAFKREL  60
PLCMQLLTNA LEASRQQLQA YRANQGPRPV LEEFIPLKKS PSEGTEKTSS NLSDKANWMT  120
SAQLWSQASD GTKQQTGTIT SPPKEIDIGF NVSPKLALDN KPRNGGAFLP FSKDRNMSTN  180
PTFQALPELA LASNEKEMED KKYTDTENGI LCPRRDNNNN NTNSIKGGNI INGMVIEQAK  240
ATGSSPEGQP VVSNTAANTT SSTNPQTHRK ARRCWSPDLH RRFVNALQML GGSQVATPKQ  300
IRELMKVDGL TNDEVKSHLQ KYRLHTRRPS PSPQATGAAT PQLVVLGGIW VPPEYATAAA  360
AAAHGGSPAL YGAHPASHAP PHYCTPTVPA QEYYTSAGPP PSTPHHEIHH HPLHHQIHVY  420
KATSQTHSSP ESGMRGTGDQ SESIEDGKSE SSSWKGDTSG ENGGDQRKGL SNLRDDNEES  480
NGSEITLKF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03500.1	1e-129	G2-like family protein