PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM66001.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family MYB_related
Protein Properties Length: 194aa    MW: 22789.7 Da    PI: 5.0696
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM66001.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding31.15.3e-102570247
                     SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     g+W +eE+  ++++  + G g+Wk++a+    +Rt  q++s+ qky
       OWM66001.1 25 GAWNQEEHRNFLRGLYKCGWGNWKLVAQNYVRTRTQWQIVSHAQKY 70
                     89*****************************9*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 194 aa     Download sequence    
MEGYQIPNQS MRPQWLTQQE NKREGAWNQE EHRNFLRGLY KCGWGNWKLV AQNYVRTRTQ  60
WQIVSHAQKY QLRYYETEKK RRSIHDTTLE DEHGNLLPLP VPPWPTVKDT APAVLLPPNG  120
QLPQNLQGAL NQLELDEVVR KHVEVLLSDY SIDEIEININ DFLPPDDLLL NPSYLFSSFF  180
FAFPELGPCE FHTD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61620.13e-19MYB_related family protein