PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM66031.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family LFY
Protein Properties Length: 417aa    MW: 47620.4 Da    PI: 7.1967
Description LFY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM66031.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FLO_LFY576.47.3e-176173814385
     FLO_LFY   4 eafsaslfkwd.praaa..aapparlleeaavseapleaaaaaaarklreleelfkayGvryltvakiaelGftvstLvdmkdeelddlmkslseifrl 99 
                   f+aslfkw  p+     ++pp+ l+  + +s++p       +   + ++eelf+ayG+ry+t+akiaelGftv+tL+dmk+eeldd+m+sls+ifr+
  OWM66031.1  17 AIFTASLFKWPdPNRLLepVPPPHPLALPQPLSPPPPPLPPPPQPPGMVGMEELFQAYGIRYFTAAKIAELGFTVNTLIDMKEEELDDMMNSLSQIFRY 115
                 469*******7555554446677888888877777766777777777**************************************************** PP

     FLO_LFY 100 dllvGeryGikaavraerrrleeeeaekkrrkllsedeetaldalsqeglseepvqeekeaagsggeglgeaelvaaeekkseeekkkaskkkqkrkkk 198
                 +llvGeryGik+avraerrrl +           s+ ++t++dalsqeglseepvq+e++ a+ g + +g  ++++++ +    +++     +++r++ 
  OWM66031.1 116 ELLVGERYGIKSAVRAERRRLLHPA---------SDGTATVMDALSQEGLSEEPVQQENNGAVEGAADVGGDGVIGKKLA----RQR-----RNRRRRP 196
                 *********************9855.........4566789****************99988888888777777666521....122.....2222222 PP

     FLO_LFY 199 kelkseededeeeeededeegsgedgeerqrehPfivtepgevargkknGLDYLfdLyeqCrefLlqvqkiakerGekcPtkvtnqvfryakkagasyi 297
                 ++++    ++ee+++ded++++ ed   rqrehPfivtepgevargkknGLDYLf+Ly+qCrefL+qvq+iakerGekcPtkvtnqvfryakkagasyi
  OWM66031.1 197 RRRRG---DNEEDDDDEDDDEEEEDQYRRQREHPFIVTEPGEVARGKKNGLDYLFHLYDQCREFLIQVQNIAKERGEKCPTKVTNQVFRYAKKAGASYI 292
                 22111...22222233333444555678*********************************************************************** PP

     FLO_LFY 298 nkPkmrhYvhCYalhcLdeeasnalrrafkergenvGawrqacykplvaiaarqg.wdidavfnahprLsiWYvPtkLrqLChlerska 385
                 nkPkmrhYvhCYalhcLdeeasnalrrafkergenvGawrqacy+plvaiaar+g wdidavfn+hprL +WYvPt+LrqLCh+ers+ 
  OWM66031.1 293 NKPKMRHYVHCYALHCLDEEASNALRRAFKERGENVGAWRQACYRPLVAIAAREGsWDIDAVFNSHPRLVVWYVPTRLRQLCHAERSRL 381
                 **************************************************998755******************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 417 aa     Download sequence    
MDPGDQHHHH HHHHHQAIFT ASLFKWPDPN RLLEPVPPPH PLALPQPLSP PPPPLPPPPQ  60
PPGMVGMEEL FQAYGIRYFT AAKIAELGFT VNTLIDMKEE ELDDMMNSLS QIFRYELLVG  120
ERYGIKSAVR AERRRLLHPA SDGTATVMDA LSQEGLSEEP VQQENNGAVE GAADVGGDGV  180
IGKKLARQRR NRRRRPRRRR GDNEEDDDDE DDDEEEEDQY RRQREHPFIV TEPGEVARGK  240
KNGLDYLFHL YDQCREFLIQ VQNIAKERGE KCPTKVTNQV FRYAKKAGAS YINKPKMRHY  300
VHCYALHCLD EEASNALRRA FKERGENVGA WRQACYRPLV AIAAREGSWD IDAVFNSHPR  360
LVVWYVPTRL RQLCHAERSR LCTSAASSSV SGGGTTAATQ HHHHHQQQHQ HQHIPPY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1189194RRNRRR
2190197RNRRRRPR
3192199RRRRPRRR
4193200RRRRPRRR
5194201RRRRPRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61850.11e-101LFY family protein