PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM66097.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

MYB

Protein Properties

Length: 277aa MW: 30631.4 Da PI: 7.0456

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM66097.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	45.8	1.4e-14	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 rg+W+++Ed +l+ + +G+g +W t +++ g++R++k+c++rw++yl OWM66097.1 14 RGPWSPDEDAILKTHIDNHGTGgNWITLPQKAGLKRCGKSCRLRWLNYL 62 89*********************************************97 PP
2	Myb_DNA-binding	34.9	3.5e-11	69	116	2	46
SSS-HHHHHHHHHHHHHTTTT....-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg....tWktIartmgkgRtlkqcksrwqk 46 g +T+eEd ++ + G++ W+ Ia+ ++ gRt++++k++w++ OWM66097.1 69 GGFTEEEDNIICSLYLTIGSRqvtiLWSVIASNLP-GRTDNDVKNYWNT 116 569******************************.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 277 aa Download sequence
MGRAPCCDKA NVKRGPWSPD EDAILKTHID NHGTGGNWIT LPQKAGLKRC GKSCRLRWLN 60 YLRPDIKHGG FTEEEDNIIC SLYLTIGSRQ VTILWSVIAS NLPGRTDNDV KNYWNTRLKK 120 KLLAAGIISS DSAKVADINM TNCNLRRGII TNNYENHSAS LITNPSTSLP HHLLHSSSYH 180 QETSFFSPSP SLPSLTEVSD NTSNIPIANM DFHVSSSQEL SSSSGSPALA TIMDSYDDLS 240 IDKLLDLDFG TVYEILSRSF SFKQETSSHL LGPYTIN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G49690.1	1e-74	MYB family protein