PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM66236.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

Protein Properties

Length: 515aa MW: 57491.4 Da PI: 8.7937

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM66236.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	59.8	4.9e-19	147	238	1	100
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 f+kvl++s+v++ l +p +f +++ + +++ +++ede+g+++evk+i +k++ l++GW++F +++L egD++vF+l++ s+ l+v+++rk OWM66236.1 147 FIKVLVRSHVGSCFFLGFPSPFGKAYLPQ--TDTAIIVEDEQGKQYEVKYIGQKTG----LSAGWRQFSVDHNLLEGDVLVFQLVEASK--LKVHIIRK 237 89*********************9533..5679***********444444....*********************987555..59999998 PP S CS B3 100 s 100 s OWM66236.1 238 S 238 5 PP

Sequence ? help Back to Top
Protein Sequence Length: 515 aa Download sequence
MEPAEVKSEA PEVEEGTPNN TPTPPPPPAE KHTRRNLRGS ASDVNNNDEA ATLAELWPSR 60 KSKSDTAATS GKAGKTVEKK DWTSKMRKRL SNSTTKPPVA LRSGKRLSYK KYMSSIDRSG 120 TPTVTRTAVW LKAEEVRSNL DPNFPSFIKV LVRSHVGSCF FLGFPSPFGK AYLPQTDTAI 180 IVEDEQGKQY EVKYIGQKTG LSAGWRQFSV DHNLLEGDVL VFQLVEASKL KVHIIRKSDN 240 REIEGAVGLL NPDSPAENPG TDIPQADMIA SKRGRRKRPK SLPLSILQKN KKKPRQQKSL 300 TPEIGRSAQQ SGNDSEEVGS EVLESSRLSV TKVQFKDVAA LENFKILIEG VLVDSEFLED 360 TRRKYYELCC SQNEFLHENL MEGINLKLII GAIAEIVGIS DAIRACDLAT TQDKFLSWDR 420 TLHAFELLGM KVGFLRKRVN WLITLAFESE SAAEARKLAE AKSKRASAEE EIRKLELRLL 480 ELEEVNENLG AEIESLRPKV ETHALKFLEE VNAPW

Sequence ? help Back to Top

Protein Sequence Length: 515 aa Download sequence

MEPAEVKSEA PEVEEGTPNN TPTPPPPPAE KHTRRNLRGS ASDVNNNDEA ATLAELWPSR  60
KSKSDTAATS GKAGKTVEKK DWTSKMRKRL SNSTTKPPVA LRSGKRLSYK KYMSSIDRSG  120
TPTVTRTAVW LKAEEVRSNL DPNFPSFIKV LVRSHVGSCF FLGFPSPFGK AYLPQTDTAI  180
IVEDEQGKQY EVKYIGQKTG LSAGWRQFSV DHNLLEGDVL VFQLVEASKL KVHIIRKSDN  240
REIEGAVGLL NPDSPAENPG TDIPQADMIA SKRGRRKRPK SLPLSILQKN KKKPRQQKSL  300
TPEIGRSAQQ SGNDSEEVGS EVLESSRLSV TKVQFKDVAA LENFKILIEG VLVDSEFLED  360
TRRKYYELCC SQNEFLHENL MEGINLKLII GAIAEIVGIS DAIRACDLAT TQDKFLSWDR  420
TLHAFELLGM KVGFLRKRVN WLITLAFESE SAAEARKLAE AKSKRASAEE EIRKLELRLL  480
ELEEVNENLG AEIESLRPKV ETHALKFLEE VNAPW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19184.1	2e-30	B3 family protein