PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM66250.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ERF
Protein Properties Length: 236aa    MW: 25857.6 Da    PI: 6.9176
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM66250.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.21.2e-19108156355
         AP2   3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 y+GVr+++ +g+W+AeIrdp+    r +r++lg+f tae+Aa+a+++a+ +++g
  OWM66250.1 108 YRGVRQRP-WGKWAAEIRDPR----RaARVWLGTFETAEQAARAYDRAAIEFRG 156
                 9*******.**********82....48************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
MEESSDVPAD EQEHNIIVSA LKHVLTFGHE GGPSEAQNEP PASVLALPDG AMCQQCWIGG  60
CLGCNYFPQD GTTDRVNVRS DVGRGARARA RQANNGGGGN GRAVKRNYRG VRQRPWGKWA  120
AEIRDPRRAA RVWLGTFETA EQAARAYDRA AIEFRGARAK LNFPDSEAKA RAPGDGVVPN  180
RNGTRQCAQK EASSETVGPE ARGEGEKVGS GDEFWEMFER EELKDWMAIY NKLSSH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.11e-30ERF family protein