PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM66252.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

HSF

Protein Properties

Length: 282aa MW: 31204.9 Da PI: 9.2305

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM66252.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	118	5.4e-37	10	101	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k+y++++d++++++isw+eng++fvv+++ efak++LpkyFkh+nf+SFvRQLn+YgF+k+ ++ weF++++Fk+ +k+ll+ki+ OWM66252.1 10 FLTKTYQLVDDSSTDDVISWNENGDTFVVWKNAEFAKDLLPKYFKHNNFSSFVRQLNTYGFRKTVPDK---------WEFANDNFKRAHKDLLCKIR 97 9*************************************************************9999.........**************** PP XXXX CS HSF_DNA-bind 99 rkks 102 r+k OWM66252.1 98 RRKA 101 96 PP

Sequence ? help Back to Top
Protein Sequence Length: 282 aa Download sequence
MSQRSVPAPF LTKTYQLVDD SSTDDVISWN ENGDTFVVWK NAEFAKDLLP KYFKHNNFSS 60 FVRQLNTYGF RKTVPDKWEF ANDNFKRAHK DLLCKIRRRK AATLPPLPAA TPAQKTATGV 120 SPSPSNSTGD DPGSTSSKNS TASSVDDHRQ TAAAASQLAV LADENKRLKR HNEMLSSELT 180 ETKKRCDEVV SFLTECLKVG PDQIDQIMRQ GSCGSTRDAT TIKCAAEGGS CEYGEGDSSR 240 LKLFGIWLND EGKNARKRVR EEKAIGFAEH HANKNKALGV RA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36990.1	4e-75	HSF family protein