PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM66265.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family bHLH
Protein Properties Length: 236aa    MW: 25806.3 Da    PI: 8.7009
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM66265.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.31.3e-08157197954
                 HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  r RR+ri +++  L++l+P       +K++ a++L +A++Y+k L
  OWM66265.1 157 ARHRRERISERIRILQRLVPGG-----TKMDTASMLDEAIHYVKFL 197
                 699*****************87.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
MESDNMMKLS PDDHMEVLTF LMQMEKLPEY IDSQPDSGNL SSLSPETAGI SLDLSGNSAL  60
SPMFHSSSTY NGNGVPISEP AGASRQHAWS GAYASPPHCS GSRRGGSGSN AVGSMAEMRE  120
MIFRIAAMQP IYIDPEAVKP PKRRNVRISK DPQSVAARHR RERISERIRI LQRLVPGGTK  180
MDTASMLDEA IHYVKFLKRQ VQTLEQASVH NKPNMVGGSS CLGFPVAHMN NSPNLL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67060.11e-44bHLH family protein