PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM66282.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ERF
Protein Properties Length: 175aa    MW: 18708.9 Da    PI: 8.4648
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM66282.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.89.7e-172574255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                 ykG+r +k +g+WvAe+r+p   +kr r++lg++ t+  Aa+a++ a  +l+g
  OWM66282.1 25 PYKGIRMRK-WGKWVAEVREP---NKRSRIWLGSYSTPVAAARAYDTAVFYLRG 74
                59*****99.*******9998...337*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 175 aa     Download sequence    
MESGESVETR KRCGGGGGGG TRERPYKGIR MRKWGKWVAE VREPNKRSRI WLGSYSTPVA  60
AARAYDTAVF YLRGPSARLN FPEFVAAEGV ASGADGGVDV SAAFIRRKAA EVGARVDAAL  120
NRGLNGMVGC GDYESCCEVK MSSGGSNSSC GRSVLEKVDL NKLPNPEDYS DSDEQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G23340.19e-51ERF family protein