PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM66299.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family B3
Protein Properties Length: 319aa    MW: 36316.5 Da    PI: 10.6702
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM66299.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B354.61.9e-1721115299
                 EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SSSEE..EEEEE-S CS
          B3   2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.grsefelvvkvfrk 99 
                 fk+ +   + ++g lv+pkkf++++g++   s  ++l+ ++g  Wev+l  rk+ + ++l+kGW +F++   +k g f+vFk++ g s+  + v vf+k
  OWM66299.1  21 FKIIL-QQTIRTGKLVVPKKFVRKYGKDLSLSNAVILKVPNGDAWEVEL--RKGASDVWLQKGWLDFANFYSIKHGYFLVFKYEpG-SSNGFDVVVFDK 115
                 55553.35566778***********99999*******************..********************************955.444469988887 PP
2B349.29.6e-16220305590
                 -..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
          B3   5 ltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsef 90 
                  +++  l+++ l++p +fa+e  ++k   +k++   + + rsW vkli++++++  +++++G   F k+n Lk+gD ++F+l+++ e 
  OWM66299.1 220 VMTEGILSHRFLRIPTRFAKEQiNLK--LQKQMATLQIEDRSWPVKLIISGHPCPqVMFSGGLGAFLKDNSLKAGDLCTFELIQKAEI 305
                 45777889999********9997444..445677777888*********9999988*************************9985443 PP
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    
MEDNIVHRIS SFFHPTAPHF FKIILQQTIR TGKLVVPKKF VRKYGKDLSL SNAVILKVPN  60
GDAWEVELRK GASDVWLQKG WLDFANFYSI KHGYFLVFKY EPGSSNGFDV VVFDKSATEI  120
EYPMKSKSLP GRMLQSYLGQ HKSGKMELLV SGDKNGPCHI IFQHIGLKNV SLKVSIFRAP  180
RVADSRILRS QAKKKQKIAQ SSEFQLVAFI SERRPSFQMV MTEGILSHRF LRIPTRFAKE  240
QINLKLQKQM ATLQIEDRSW PVKLIISGHP CPQVMFSGGL GAFLKDNSLK AGDLCTFELI  300
QKAEIVFRTS IRAKNVKKD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.14e-23B3 family protein