PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM66301.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family B3
Protein Properties Length: 114aa    MW: 13136 Da    PI: 5.8735
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM66301.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B352.59e-178921399
                TT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3 13 sgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                 ++ ++pkkf++++g +  +s  + l+ +++  Wev+l  r ++g+++l++ W +Fv+ + +k gDf+vF ++ r++ e+ v++f++
  OWM66301.1  8 MSLQIIPKKFVRKYGAELSKSDIVLLKIPTSDAWEVEL--RTGDGAVWLEQRWLDFVNFHSVKRGDFLVFWYKARNSNEFDVGLFDN 92
                34459*********77766775666666**********..*********************************9999999****997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 114 aa     Download sequence    
MISTSVNMSL QIIPKKFVRK YGAELSKSDI VLLKIPTSDA WEVELRTGDG AVWLEQRWLD  60
FVNFHSVKRG DFLVFWYKAR NSNEFDVGLF DNSATDIDYL LKGNFIIDQG RGNQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01580.12e-13B3 family protein