PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM66303.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family B3
Protein Properties Length: 251aa    MW: 28152.7 Da    PI: 7.0235
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM66303.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B339.31.2e-121452191590
                 -EE--HHH.HTT---..--SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
          B3  15 rlvlpkkfaeehggkkeesktltledesgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 
                  +++p + a+e g+ +++    ++  +sgr W v l+  +++ +r  ++ GW++Fv +ngL  gD++ +++ g +  
  OWM66303.1 145 FMTIPATVAREAGQFTKT--GAVISGSSGRHWPVGLRLrTNGCRRLDISCGWSRFVGDNGLAHGDTLRLEFRGGKAN 219
                 489******999655444..488899**********995555556************************98765444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    
MKQKENGLYI TRGWTQIVTD LDLDLGDFLV FKLISEETLR VVAYGLTCCE KKMDIKLKQD  60
REGEANDHCG GGGVEVKSEE EEHEEEDDDD EEEEDEEEER IKTTSGDSEG GRVATVGRAR  120
AHPSFSSKKP YPYFDKYLRK YNSLFMTIPA TVAREAGQFT KTGAVISGSS GRHWPVGLRL  180
RTNGCRRLDI SCGWSRFVGD NGLAHGDTLR LEFRGGKANL IKARVVRRAS GPRIIPLRRK  240
SSRNNVLGLL I