PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM66376.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family MYB_related
Protein Properties Length: 88aa    MW: 10185.4 Da    PI: 4.861
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM66376.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.61.4e-081760344
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44
                      WTte  +l+ +a + +  +   +W  Ia+ +g g + +++k ++
       OWM66376.1 17 TWTTEQNKLFENALAVHDREtpnRWQDIAKAVG-GTSVNEVKRWY 60
                     7*****************88*************.********987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 88 aa     Download sequence    
MVTTMESELV SSSDSRTWTT EQNKLFENAL AVHDRETPNR WQDIAKAVGG TSVNEVKRWY  60
EILQRDIELI ESDKIPIPKY RTSSESKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39250.15e-27MYB_related family protein