PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM66382.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ZF-HD
Protein Properties Length: 272aa    MW: 30328.2 Da    PI: 8.495
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM66382.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer92.73.3e-294497458
  ZF-HD_dimer  4 vrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58
                  rY eCl+Nh a++G+h +DGCgEfmp  geegt++++kCaAC+CHRnFHR+ ++
   OWM66382.1 44 SRYMECLRNHGAAIGAHILDGCGEFMPG-GEEGTPESFKCAACECHRNFHRKLQS 97
                 69*************************9.999********************876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    
MGSIPNPFSL VYNNLTPEPS SSEVNRGARC TKLPDDPSPS ASLSRYMECL RNHGAAIGAH  60
ILDGCGEFMP GGEEGTPESF KCAACECHRN FHRKLQSEVE TGSWDFPSSL YMTNYQKYSS  120
FNLGKNAGFA PRPLIMPSIV HHHQHPKRFP AAPLMVAFGS RAIPDAAGSS SEDDLNTDRD  180
HTPIPSDGTG HILEGHHQQS GVKNKRFRTK FTREQKDKMA DFAEKLGWKI GKQDEHELAR  240
FCAEAGVKMQ VFKVWMHNSK QAMKRKLQIS KD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G18350.12e-51ZF-HD family protein