PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM66504.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family C2H2
Protein Properties Length: 248aa    MW: 26072.6 Da    PI: 4.5889
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM66504.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2193.8e-06114135223
                 EETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   2 kCpdCgksFsrksnLkrHirtH 23 
                 +C+ Cgk F++   L  H+r+H
  OWM66504.1 114 PCSVCGKQFTSYKALFGHMRSH 135
                 5********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
MTHKQQGHTG PSAGGDDQGG EEGSPPCQAS PRKDQASSDQ GADDVPVPQP LLDTGESVGQ  60
QAQEIGGEGP STGRGKKRGR LPKGKEVASE AAALMEAERP KKKVEFDAPE VPRPCSVCGK  120
QFTSYKALFG HMRSHPDRLW RGAFPPPSAS PPSSPGQDIV QQGEQLASSL LSIGQRMLEA  180
TNEASDETAT TLCDQSTRGA NPRGLDIDLN MPLDPIPSEP SSPVKEAGGN KEIDLNKEAS  240
DDSEGNNQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35280.12e-13C2H2 family protein