PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM66779.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family GRAS
Protein Properties Length: 799aa    MW: 88885.9 Da    PI: 4.7488
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM66779.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS360.62.2e-1104197961373
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                 l++lL+ cA+a+ss+dl+ a++lL+++++++sp+gd  qRla+yf+++L+ar+a++++++ + +++   ++++++++l+ ++l    +P+ k++ +  N
  OWM66779.1 419 LRTLLILCAQALSSNDLRTANELLKQIRQNSSPSGDGSQRLAHYFANGLEARMAGNGEGTQNFCHAIVMQRRSVADVLKGYQLHISSCPFKKLTIMYMN 517
                 5789**********************************************************99999999999************************** PP

        GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrv 196
                  +Il+  e+++ +HiiDf+i  G+QWp L+q+L ++p+g+p+lRiTg++ p++g   +e++eetg+rLa+++++++vpfefn+l ++++e++++e+L++
  OWM66779.1 518 YMILKLSEKASVLHIIDFGIAFGFQWPILIQKLGEQPGGSPKLRITGIELPQPGfrPAERIEETGQRLAQYCKRFNVPFEFNALPSRNWETIRVEDLKI 616
                 *****************************************************9******************************999************ PP

        GRAS 197 kpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklp...reseerikvErellgr 292
                 ++gE++aVn+ ++  +llde+v+ +s+rd+vLkl+++++P+v+v++  + ++n++ F++rf eal + s+++d+++a++    r+s+er+ +E e+ gr
  OWM66779.1 617 RSGEMIAVNCLYRFSSLLDETVDEDSPRDAVLKLIREIKPDVFVHTITNGSYNAPFFVTRFREALFHLSSIYDMFDATITgqqRDSKERTILESEFYGR 715
                 ************************************************************************99988865111566************* PP

        GRAS 293 eivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                 ei+nvvaceg er+ r e++++W+ r ++aGFk++pl+++++k+ ++ l+  + + + ++e+ ++++lgWk+r ++++++W
  OWM66779.1 716 EIMNVVACEGPERVDRPESYKQWQVRHGRAGFKQLPLEQEVMKKLRHKLECWYHKDFVLDEDGNWMLLGWKGRIIYATTCW 796
                 *****************************************************888************************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 799 aa     Download sequence    
MAMDPRFDDL SFSIDDFNFD DGRSPLPDSN QSLNFVNGVE PDEPALGFDS VTVPPFSTQP  60
VALNYVPVIS TDDLDGELVF PGELGGGSLE PSVSTGTGLS AGGESPSSSD DSDSSDPVLK  120
YISQMLMEEN MEEKIWISPD AFALQHTEKS LYDALGERYP DSPDQFHNFD VSQFIESPSG  180
NFSGSSSDHS SVGTVLTSTN SSNSIDPSWR HDTGEYNQTT TPAVHALHQV PQSDSNYSLQ  240
FYTSSLSNSI GDANELVDSS VLVKNIFTDN DSVLQFKRGL EEASKFLPPS SQLVINFENG  300
SSGSETKSRT SWVAGQDDKS GREDMLGGSR GRKNHEREDA GFEEGRATKQ SASYVEAGEA  360
ELSEMFDKVL LAVAPCSTDS CRSTDASQSK DLRTSAQVRG SNGGRGRGRR QGNQSSVDLR  420
TLLILCAQAL SSNDLRTANE LLKQIRQNSS PSGDGSQRLA HYFANGLEAR MAGNGEGTQN  480
FCHAIVMQRR SVADVLKGYQ LHISSCPFKK LTIMYMNYMI LKLSEKASVL HIIDFGIAFG  540
FQWPILIQKL GEQPGGSPKL RITGIELPQP GFRPAERIEE TGQRLAQYCK RFNVPFEFNA  600
LPSRNWETIR VEDLKIRSGE MIAVNCLYRF SSLLDETVDE DSPRDAVLKL IREIKPDVFV  660
HTITNGSYNA PFFVTRFREA LFHLSSIYDM FDATITGQQR DSKERTILES EFYGREIMNV  720
VACEGPERVD RPESYKQWQV RHGRAGFKQL PLEQEVMKKL RHKLECWYHK DFVLDEDGNW  780
MLLGWKGRII YATTCWVPS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.10.0GRAS family protein