PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM66780.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family GRAS
Protein Properties Length: 746aa    MW: 84230.6 Da    PI: 6.3735
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM66780.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS376.53.3e-1153727431373
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                 l+ lL +cA+avs++d++ a+++L+++++++sp gd  qRla++f++AL+arla +++++y++l +++t+    se+l+a++++  v+P+ +fs +  N
  OWM66780.1 372 LRALLNACAQAVSDDDHNTANHYLQQIRKHSSPFGDGSQRLAHCFAKALEARLACTGTQIYATLISKRTA---ASETLKAYQTYISVCPFQRFSIIFSN 467
                 5789************************************************************999998...9************************* PP

        GRAS 100 qaIleavege.ervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLr 195
                 ++Il  ++++ +++HiiDf+i +G+QWpaL++ L+ R++gpp+lRiTg++ p+ g   +e+++etg+rLak++++++vpfe+n+ +a+++e++++ eL 
  OWM66780.1 468 HMILTKLAEKaSTLHIIDFGILYGFQWPALIHCLSRRAGGPPKLRITGIELPQRGfrPAERVQETGRRLAKYCKRFNVPFEYNA-IAQKWETIRIAELG 565
                 ****9988776999***************************************99*****************************.7************* PP

        GRAS 196 vkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgrei 294
                 ++pgE++aVn+ ++  +l+de+v l+s+r++vL+lv +++P +++++  + ++n++ F++rf eal++ysa+fd+++aklpre+ +r + E+ + gre+
  OWM66780.1 566 IRPGEVVAVNCLFRFRHLFDETVVLNSPRNQVLNLVSKIRPSLFTHSIVNGNYNASFFVTRFREALYHYSAMFDAFDAKLPREDPTRLTFEENFYGREA 664
                 *************************************************************************************************** PP

        GRAS 295 vnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                 +nv+ace +er+er et+++W+ r ++aGFk++pl+  + ++ ++ l++ + + + ++ + +++++gWk+r L++ S+W
  OWM66780.1 665 MNVIACESTERIERPETYKQWQIRNTRAGFKQLPLDPVILQKLRSKLKEGYHEDFVIDVDGNWMLQGWKGRILFASSCW 743
                 *************************************************99899************************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 746 aa     Download sequence    
MDPYFVQPCH PLNGFSFREE SLFPFPHGNL SASLSFSPFP FVASEPSNSP ATSSVVAEGD  60
LPFCDSDLDD TVFKYINQML MEEDLEERPC MFHDPLALQA TEKSFYDALC ENRHPSMNNS  120
LSPPYADNSD DNSSGVSSDN GSNCNSSVTS GSPSVDSQWT FDASDYRPSI LQSPVPENFV  180
FQSTANSNAR TSPDSQRRFV DCNGTSSVGE LLVQNFFSDE LSMSYFRKGM EEASKFLPKG  240
NPLLMDSETG TFKSAPRRYN SASRANSEKD AVQHLSSPPY GLRLKKHERE DTGSEEERSS  300
KQSAVCLEDE TELSEMFDRV LLCAPTKESS NKTMQNESSQ TETTTQSVQS IRFTDEKPLS  360
NMTVNKKGMV DLRALLNACA QAVSDDDHNT ANHYLQQIRK HSSPFGDGSQ RLAHCFAKAL  420
EARLACTGTQ IYATLISKRT AASETLKAYQ TYISVCPFQR FSIIFSNHMI LTKLAEKAST  480
LHIIDFGILY GFQWPALIHC LSRRAGGPPK LRITGIELPQ RGFRPAERVQ ETGRRLAKYC  540
KRFNVPFEYN AIAQKWETIR IAELGIRPGE VVAVNCLFRF RHLFDETVVL NSPRNQVLNL  600
VSKIRPSLFT HSIVNGNYNA SFFVTRFREA LYHYSAMFDA FDAKLPREDP TRLTFEENFY  660
GREAMNVIAC ESTERIERPE TYKQWQIRNT RAGFKQLPLD PVILQKLRSK LKEGYHEDFV  720
IDVDGNWMLQ GWKGRILFAS SCWVPA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.10.0GRAS family protein