PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM66929.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family DBB
Protein Properties Length: 248aa    MW: 27288.6 Da    PI: 4.7131
Description DBB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM66929.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box216.9e-07444539
    zf-B_box  5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htv 39
                 C+ +e+ +++  C  ++  lC +C +e H        H++
  OWM66929.1  4 QCDVCERAPATVICCADEAALCSKCDFEVHAAnklaskHQR 44
                7*****************************65667777765 PP
2zf-B_box35.81.6e-115591339
    zf-B_box  3 erkCpeHeekelqlfCedCqqllCedClleeHkgHtv 39
                 ++C+ ++ek + +fC +++ l+C+dC +++H+ H++
  OWM66929.1 55 LPRCDICQEKAALIFCVEDRALFCQDCDESIHSAHSL 91
                689*****************************99*87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
MKIQCDVCER APATVICCAD EAALCSKCDF EVHAANKLAS KHQRLLLQCL SNYKLPRCDI  60
CQEKAALIFC VEDRALFCQD CDESIHSAHS LSANHQRFLA TGIRVALSSK CTSGSQKGPF  120
EPPSQNTPQN PMKTPKPQQA SLSTGWSVDE LLQLSELESS EKKDQLGFGE LEWLADVGLF  180
GEQSTHHQET LTAAEVPQLP VSQPSSFPAP NCRTNKFTVS AQKKPRIDIA EDDDDDDEHF  240
TVPDLGLD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31380.12e-74DBB family protein