PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM67010.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family GRAS
Protein Properties Length: 812aa    MW: 86524.1 Da    PI: 6.1841
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM67010.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS409.33.7e-1254337902373
        GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
                  +lLl+cAeavs+++le+a+++L ++sel++p+g++ qR+aayf eA++arl++s+ ++y++lp+ + s     +  +a+++f+ +sP++kfsh+taNq
  OWM67010.1 433 LTLLLQCAEAVSADNLEEANRMLLEISELSTPYGTSAQRVAAYFSEAISARLVSSCLGIYASLPAAPHS----HKISSAFQVFNGISPLVKFSHFTANQ 527
                 579************************************************************999996....788899******************** PP

        GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpg 199
                 aI ea+e+e+rvHiiD+di+qGlQWp L++ LasRp+gpp++R+Tg+g+    s e+le+tg+rLa+fA++lg+pfef + va+++ +l++e+L+v+++
  OWM67010.1 528 AIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPHVRLTGLGN----SMEALEATGKRLAEFADKLGLPFEFCP-VAEKVGNLDPERLNVSKR 621
                 *************************************************....***************************.7***************** PP

        GRAS 200 EalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvv 298
                 Ea+aV++    h+l+d ++s ++    +L+l+++l Pkvv+vveq+++  ++sFl rf+ea++yysalfdsl a++++eseer++vE++ll+rei+nv+
  OWM67010.1 622 EAVAVHWLQ--HSLYDVTGSDTN----TLWLLQRLAPKVVTVVEQDLSQ-AGSFLGRFVEAIHYYSALFDSLGASYGEESEERHVVEQQLLSREIRNVL 713
                 ********9..999999999999....********************98.899********************************************** PP

        GRAS 299 acegaerre..rhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                 a  g +r      ++ ++Wr++l++aGF++v+l  + a+qa lll +++ +gy++ e++g+l lgWkd  L+++SaW
  OWM67010.1 714 AVGGPSRSTaaAVRSGGSWRDKLRQAGFRSVSLAGNPANQATLLLGMFSCEGYTLVEDNGTLKLGWKDLCLLTASAW 790
                 *****987511578899************************************************************ PP
Sequence ? help Back to Top
Protein Sequence    Length: 812 aa     Download sequence    
MAACALVSSS DADNSASPNT HMSTTGSNLH YHYHTDPLLL LNAAAPPLPP PPAAAAFPHP  60
NSLLQLQQQQ YYNSISGARM VRKRMASEME AAHVTSAGAG GDAYFRFSQR GGANPNGLDG  120
DSVQSFQSHT PNTAITLPNH STTTAATSLT ATSPCSAFLS PAAVTTATTP APAPLPYIDT  180
SLPPPANHLT SPAAAEAPAL CVFSGLPLFP PDRTRSSSAA VATPVASSAG NMDDGSTATW  240
VDGIIKDLIH SSSNVSIPQL IQNVRDIIYP CNPSLASVLE FRLRSLTEPV ASAASILPRQ  300
RQYNQFGSSS LRLNLDSTAL DSIPYHSDLA AYLNYPVPLP STAPAVPRLD ERPVPPPEPQ  360
PEPLPRHQQQ PQQQAPESEP EKSSPSAEAA SSADNGTGAT SAAAAAAAAA AALAREKEEK  420
KQKKKDEEGL HLLTLLLQCA EAVSADNLEE ANRMLLEISE LSTPYGTSAQ RVAAYFSEAI  480
SARLVSSCLG IYASLPAAPH SHKISSAFQV FNGISPLVKF SHFTANQAIQ EAFEREDRVH  540
IIDLDIMQGL QWPGLFHILA SRPGGPPHVR LTGLGNSMEA LEATGKRLAE FADKLGLPFE  600
FCPVAEKVGN LDPERLNVSK REAVAVHWLQ HSLYDVTGSD TNTLWLLQRL APKVVTVVEQ  660
DLSQAGSFLG RFVEAIHYYS ALFDSLGASY GEESEERHVV EQQLLSREIR NVLAVGGPSR  720
STAAAVRSGG SWRDKLRQAG FRSVSLAGNP ANQATLLLGM FSCEGYTLVE DNGTLKLGWK  780
DLCLLTASAW SPMISSSPSL HVNPNPTRHY SH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54220.10.0GRAS family protein