PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM67198.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family bHLH
Protein Properties Length: 372aa    MW: 40318.2 Da    PI: 9.7763
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM67198.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.11.2e-11300345655
                 HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +++Er RR ri +++ +L+el+P+     +k  + a++L +Av YIk+Lq
  OWM67198.1 300 SIAERVRRTRISERMRKLQELVPNM----DKQTNTADMLDLAVGYIKDLQ 345
                 689*********************7....688*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 372 aa     Download sequence    
MDSETPQQLG YGLLRFRSAS SYLLGGFAET GPGKVSLGAE GLEAEKFGSR FMGFSGADVF  60
EEKPKQSPGI SPRGYSGLPP QYPRPSSGLS SSPLEGAYTG VGPMGVDHQS QPKLNSSNLA  120
RQSSSPAGLF SQVSNQNGYA SVKGMGNYRM GSGFDGELSP PTNRSKGPFS FPSSLGMLSQ  180
ISEIGSESLG EGGPDDSSRI GIGNSEGRFL GSGFHFNSWN DSSHFSDNFT SLKRERDNDI  240
KLFPGSQNNE LGSRGPLLSR HLSLQRSSSE MSTMEKLLQF QDSVPCKIRA KRGCATHPRS  300
IAERVRRTRI SERMRKLQEL VPNMDKQTNT ADMLDLAVGY IKDLQKQFKT LSAIRANCKC  360
LNMQNSVANK II
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42280.12e-83bHLH family protein