PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM67238.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

C2H2

Protein Properties

Length: 293aa MW: 32110.7 Da PI: 8.4183

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM67238.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.6	2.2e-05	265	287	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +Cp+C++ F+++ +L+ H + H OWM67238.1 265 VCPKCSRGFRDPVSLVEHVERdH 287 7*****************99888 PP

Sequence ? help Back to Top
Protein Sequence Length: 293 aa Download sequence
MGTPEFPDLG KHCMVEDCQQ IDFLPFTCDR CNRVFCLEHR SFIKHQCPKA DKKDVTVVIC 60 PLCAKGVRLI PDEDPNITWE SHVNTECDPS NYEKVTKKRK CPVPGCREVL TFSNIIKCKD 120 CTLDHCLKHR FGPDHKCPGP KKPETAFSFI SALSRSRKDT PSKKPTQVSA GSSKWSASLL 180 SAASSFRAST EAGVARLGNE FNRALQIAKE GMGPSSSDGN GAGEAEVCPQ CGAKFAAVTA 240 LIEHVQKVHE NGGNRRGVRK VTIDVCPKCS RGFRDPVSLV EHVERDHGGT SRA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G41835.1	1e-126	C2H2 family protein