PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM67256.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family HSF
Protein Properties Length: 254aa    MW: 29458.1 Da    PI: 9.3873
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM67256.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind110.21.5e-34241152102
                   HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS
  HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 
                   Fl k+y ++ed++++e+isw+++g+ fvv+++ efa+++Lp+ Fkhsnf+SFvRQLn+YgF+kv + +         weF ++ F+kgkkell++i+
    OWM67256.1  24 FLLKTYMLVEDPATDEVISWNSDGSGFVVWQPPEFARDLLPTLFKHSNFSSFVRQLNTYGFRKVATAR---------WEFCNDMFQKGKKELLCEIR 111
                   9****************************************************************999.........******************** PP

                   XXXX CS
  HSF_DNA-bind  99 rkks 102
                   r+k 
    OWM67256.1 112 RRKA 115
                   *985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    
MERSSSQKGN NLLEYVRKST PPPFLLKTYM LVEDPATDEV ISWNSDGSGF VVWQPPEFAR  60
DLLPTLFKHS NFSSFVRQLN TYGFRKVATA RWEFCNDMFQ KGKKELLCEI RRRKAWANKL  120
HPTVRAASRQ DNHQQFNNID EDQRSSSTSS SSEYSSLVDE NKRLKKENRA LSSELLSLKS  180
KCKELLDLVS KYAINNHICH NHSFGREISI REEEGGGREE EKGPKLFGVR LEEGDHHTRK  240
RKAENIREML FSQS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41690.18e-58HSF family protein