PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM67297.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ERF
Protein Properties Length: 233aa    MW: 25824.7 Da    PI: 4.7186
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM67297.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.59.4e-2091141255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr ++ +g+++AeIrd + ng   r+++g+f+taeeAa a+++a+ +++g
  OWM67297.1  91 QYRGVRKRP-WGKYAAEIRDSTRNG--VRVWIGTFDTAEEAALAYDQAAFAMRG 141
                 59*******.**********44465..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
MDYTPSSSFF HYPTSDLSAD SSSFNSSSGF FSLPFDENDS EEMLLYGVLA AAPGMDYSAY  60
ATSSAYSHPR DEEVCSKPDF DPETAPKEVI QYRGVRKRPW GKYAAEIRDS TRNGVRVWIG  120
TFDTAEEAAL AYDQAAFAMR GSAAVLNFPV EVVHRSLQDL GGDDQGQCRD VAGMSGCDSP  180
VLALKKRHLQ KRKSEIKKKR ERELTPKNAV VLEDLGAAYL EELLKISEDP SPW
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1185200KKRHLQKRKSEIKKKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.12e-37ERF family protein