PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM67356.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family MYB_related
Protein Properties Length: 168aa    MW: 19170.6 Da    PI: 4.6227
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM67356.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding29.71.5e-093341447
                     HHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding 14 davkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     ++v ++G + W+ Ia +++ gRt++++k++w+ +
       OWM67356.1  3 KVVPLFGFR-WSVIAGRLP-GRTANDVKNYWNCH 34
                     66778999*.*********.***********977 PP
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    
MLKVVPLFGF RWSVIAGRLP GRTANDVKNY WNCHLSKKLS AKQIRTDSEE NTDIGSEQIM  60
RPQPLDLSGI ISPRPGSRAG PEEAPTYYPQ LEPPLPEVST STQFLGDQPD FKTKRRRAPV  120
EEENSIVLGD LPMEFQFDDV RIDGFGSNKQ RWDWDDLFMD IDLWSSSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66370.13e-17MYB family protein