PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM67383.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

SBP

Protein Properties

Length: 976aa MW: 108890 Da PI: 7.3

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM67383.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	131.5	2.9e-41	151	228	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +CqvegC+adls+ k+yhrrhkvCe+hska +++v ++ qrfCqqCsrfh+l+efDe+krsCrrrLa+hn+rrrk+++ OWM67383.1 151 VCQVEGCKADLSNSKDYHRRHKVCEMHSKAGEAIVGNVLQRFCQQCSRFHALQEFDEGKRSCRRRLAGHNRRRRKTHP 228 6**************************************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 976 aa Download sequence
MEAKITGEKA QHFYGPVVSD AGVDRKSSEW DLNDWKWDGD LFRASPLGSA QLDYRSRQFL 60 PIGPDNAACS SSFSKGQPPS LEDANPIYGS EKREVEKRRR GALIEDEELG EGAGCLSLKL 120 GGQVYPVTDG DSKVGKKTKC VGPISISSAV VCQVEGCKAD LSNSKDYHRR HKVCEMHSKA 180 GEAIVGNVLQ RFCQQCSRFH ALQEFDEGKR SCRRRLAGHN RRRRKTHPDP IANGVSFNSE 240 RDGNYVLISL LRILANMQCN QQNISRLLQE AKNAVPSTGP ESAKASGSNF QEPARPVELN 300 IKQPSSDVAH NIDATAQGKN LGNSSTLKSM VQFPSTEFHL PQRNETEAIV GRSRINNFDL 360 NNVCEEECME NLHKERAVNL GNGSPGVPEI EEKDYQRVSP APNSSTSNST STGSPSSSSG 420 EAQSRTDRIV FKLFGKDPND LPHDLRKQIL DWLSQSPTDI ESYIRPGCII LTVYLRLKKS 480 IWEELCRDLG SNLRRLLEAS NDSFWRTGWV FTRVRSSVAF AYNGSIVLDT LLPLRNNENC 540 RIAIIKPIAV SVSESAQFLV KGFNLLESTS RLLCTLEGKY LTQRNCNELI EVDRTVEDPD 600 EPQCLTFRCS IPGVCGRGFI EVEDCSFNSS FFPFIIAEEE VCSEIRTLEN AIDTVIEDHE 660 RAKARDQALD FINEMGWLLQ CNHLKLRLKA VDLYDFSLFP LERFKWLVDF AVEKDWCAVV 720 KKLLGILFGG VVGPEEHQPI NRVLLDMGLL HRAVQRNCRA MVEFLLRYVP SEELGSEMES 780 KADPLQNCYV FKPDAAGPGG LTPLHIAAST AGSDLVLDAL TNDPTSVGLI AWKTARDNTG 840 LTPNDYACLR RHYSYIHLVQ RKINRTSNSG HSVVNIPTSL SGTHTSGTNE KAAIFETEKK 900 TSSELRALQG QCRLCERQRF HYGTAGRTSL LYRPMMFSMV AIAAVCVCVA LLFKSSPEVV 960 YGFRPFRWER LKYGSM

Sequence ? help Back to Top

Protein Sequence Length: 976 aa Download sequence

MEAKITGEKA QHFYGPVVSD AGVDRKSSEW DLNDWKWDGD LFRASPLGSA QLDYRSRQFL  60
PIGPDNAACS SSFSKGQPPS LEDANPIYGS EKREVEKRRR GALIEDEELG EGAGCLSLKL  120
GGQVYPVTDG DSKVGKKTKC VGPISISSAV VCQVEGCKAD LSNSKDYHRR HKVCEMHSKA  180
GEAIVGNVLQ RFCQQCSRFH ALQEFDEGKR SCRRRLAGHN RRRRKTHPDP IANGVSFNSE  240
RDGNYVLISL LRILANMQCN QQNISRLLQE AKNAVPSTGP ESAKASGSNF QEPARPVELN  300
IKQPSSDVAH NIDATAQGKN LGNSSTLKSM VQFPSTEFHL PQRNETEAIV GRSRINNFDL  360
NNVCEEECME NLHKERAVNL GNGSPGVPEI EEKDYQRVSP APNSSTSNST STGSPSSSSG  420
EAQSRTDRIV FKLFGKDPND LPHDLRKQIL DWLSQSPTDI ESYIRPGCII LTVYLRLKKS  480
IWEELCRDLG SNLRRLLEAS NDSFWRTGWV FTRVRSSVAF AYNGSIVLDT LLPLRNNENC  540
RIAIIKPIAV SVSESAQFLV KGFNLLESTS RLLCTLEGKY LTQRNCNELI EVDRTVEDPD  600
EPQCLTFRCS IPGVCGRGFI EVEDCSFNSS FFPFIIAEEE VCSEIRTLEN AIDTVIEDHE  660
RAKARDQALD FINEMGWLLQ CNHLKLRLKA VDLYDFSLFP LERFKWLVDF AVEKDWCAVV  720
KKLLGILFGG VVGPEEHQPI NRVLLDMGLL HRAVQRNCRA MVEFLLRYVP SEELGSEMES  780
KADPLQNCYV FKPDAAGPGG LTPLHIAAST AGSDLVLDAL TNDPTSVGLI AWKTARDNTG  840
LTPNDYACLR RHYSYIHLVQ RKINRTSNSG HSVVNIPTSL SGTHTSGTNE KAAIFETEKK  900
TSSELRALQG QCRLCERQRF HYGTAGRTSL LYRPMMFSMV AIAAVCVCVA LLFKSSPEVV  960
YGFRPFRWER LKYGSM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47070.1	0.0	SBP family protein