PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM67426.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

MYB_related

Protein Properties

Length: 443aa MW: 49491.4 Da PI: 9.7795

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM67426.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	26.1	2e-08	129	171	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +WT+eE ++l ++++q+ + + Ia +++ Rt +++k+r+++ OWM67426.1 129 AWTKEETDQLFELCEQFDLR-FVVIADRFPSSRTVEELKDRYYS 171 7*****************.*******************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 443 aa Download sequence
MDAKDILGLP KTQFPIPQEK KSRPPKEPQR KPDGISREVY ALTGGIAPLM PSIEVSQLKK 60 RPPSDEKITW QWLPFTNSAR KDDLQLFHWV RVVNGVPPTG DYAFAKYNKK VNIVKYTDEE 120 YEKYLSDPAW TKEETDQLFE LCEQFDLRFV VIADRFPSSR TVEELKDRYY SVSRAILLAR 180 APSPADVAGH PVVKEPYNMS QEIERKRALS MVLSHTKQQD RKDAEVLAEA KRITESRLAA 240 KGAEEPDLPP TAGAGAENSE KAMATGDIAS PSNPSAVPGT SVVMADNASI LASLRMLRVY 300 LRSYALDQMV QAASSSAGLR TIKRVEQLMQ ELGVNLKPKV PTKAVCAEHL ELRRDILALL 360 NLQKQLQNKE AEGSFHDSPY SEAPGTPKRS NRDQDRPFMP EALNFGADRL GKNNQKRKVP 420 GRTSEGAPSP AHKRPRKLKA SDL

Sequence ? help Back to Top

Protein Sequence Length: 443 aa Download sequence

MDAKDILGLP KTQFPIPQEK KSRPPKEPQR KPDGISREVY ALTGGIAPLM PSIEVSQLKK  60
RPPSDEKITW QWLPFTNSAR KDDLQLFHWV RVVNGVPPTG DYAFAKYNKK VNIVKYTDEE  120
YEKYLSDPAW TKEETDQLFE LCEQFDLRFV VIADRFPSSR TVEELKDRYY SVSRAILLAR  180
APSPADVAGH PVVKEPYNMS QEIERKRALS MVLSHTKQQD RKDAEVLAEA KRITESRLAA  240
KGAEEPDLPP TAGAGAENSE KAMATGDIAS PSNPSAVPGT SVVMADNASI LASLRMLRVY  300
LRSYALDQMV QAASSSAGLR TIKRVEQLMQ ELGVNLKPKV PTKAVCAEHL ELRRDILALL  360
NLQKQLQNKE AEGSFHDSPY SEAPGTPKRS NRDQDRPFMP EALNFGADRL GKNNQKRKVP  420
GRTSEGAPSP AHKRPRKLKA SDL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47210.1	0.0	MYB_related family protein