PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM67464.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

TCP

Protein Properties

Length: 460aa MW: 47637.3 Da PI: 6.9099

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM67464.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	128.1	8.7e-40	98	183	2	86
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnss 86 a k++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+pai+++tgt++++a+++ ++s +ss+ + s OWM67464.1 98 AISKRPTKDRHTKVEGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATGTGTIPANFSsLNVSIRSSGTTIS 183 6789*****************************************************************98855555444444222 PP

Sequence ? help Back to Top
Protein Sequence Length: 460 aa Download sequence
MEVMEQSNNN ATPTSQTNTN TTTPAHKQES SSAAAAAASL QLVPLQAEPP PPPGHHAGHG 60 PFMGSISSTP KQPHHQHQPL SVSAANSSSA VVTTATKAIS KRPTKDRHTK VEGRGRRIRM 120 PALCAARVFQ LTRELGHKSD GETIEWLLQQ AEPAIIAATG TGTIPANFSS LNVSIRSSGT 180 TISAPPSKSA PLSFHGGLSL YGDDTGRRLF GGGMAGLQHQ LYPTVLGSDP GGGDNSGESY 240 ITKTFREDLF KDSSHQSNEA AGGAGSPAAK QARTGVQDQE SSGQARHGSG VLPAAPAMWA 300 VAPAATNGGN AFWMLPVGSA TTAGPGVAAA AAAVHEPAAQ MWTFPAGGAS VQRVNFPAGG 360 GARFTPVQLG SMIVQQPMGT QQLGLEGGLG IMGASINSGY SSNPNPGGRV NLGMNLEHHH 420 HHHHQHQQHQ HNKQQNQTGQ QHGGSEDDDD DEDDDPTTDS

Sequence ? help Back to Top

Protein Sequence Length: 460 aa Download sequence

MEVMEQSNNN ATPTSQTNTN TTTPAHKQES SSAAAAAASL QLVPLQAEPP PPPGHHAGHG  60
PFMGSISSTP KQPHHQHQPL SVSAANSSSA VVTTATKAIS KRPTKDRHTK VEGRGRRIRM  120
PALCAARVFQ LTRELGHKSD GETIEWLLQQ AEPAIIAATG TGTIPANFSS LNVSIRSSGT  180
TISAPPSKSA PLSFHGGLSL YGDDTGRRLF GGGMAGLQHQ LYPTVLGSDP GGGDNSGESY  240
ITKTFREDLF KDSSHQSNEA AGGAGSPAAK QARTGVQDQE SSGQARHGSG VLPAAPAMWA  300
VAPAATNGGN AFWMLPVGSA TTAGPGVAAA AAAVHEPAAQ MWTFPAGGAS VQRVNFPAGG  360
GARFTPVQLG SMIVQQPMGT QQLGLEGGLG IMGASINSGY SSNPNPGGRV NLGMNLEHHH  420
HHHHQHQQHQ HNKQQNQTGQ QHGGSEDDDD DEDDDPTTDS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G35560.1	4e-61	TCP family protein